A vector implementation of the abstract MR acquisition data container class. More...
#include "gadgetron_data_containers.h"
Inheritance diagram for sirf::AcquisitionsVector:
Public Member Functions | |
| AcquisitionsVector (const std::string &filename_with_ext) | |
| AcquisitionsVector (const AcquisitionsInfo &info=AcquisitionsInfo()) | |
| virtual void | empty () |
| virtual void | take_over (MRAcquisitionData &ad) |
| virtual unsigned int | number () const |
| virtual unsigned int | items () const |
| virtual void | append_acquisition (ISMRMRD::Acquisition &acq) |
| virtual gadgetron::shared_ptr< ISMRMRD::Acquisition > | get_acquisition_sptr (unsigned int num) |
| virtual void | get_acquisition (unsigned int num, ISMRMRD::Acquisition &acq) const |
| virtual void | set_acquisition (unsigned int num, ISMRMRD::Acquisition &acq) |
| virtual void | copy_acquisitions_info (const MRAcquisitionData &ac) |
| virtual void | copy_acquisitions_data (const MRAcquisitionData &ac) |
| virtual void | set_data (const complex_float_t *z, int all=1) |
| virtual AcquisitionsVector * | same_acquisitions_container (const AcquisitionsInfo &info) const |
| virtual ObjectHandle< DataContainer > * | new_data_container_handle () const |
| virtual gadgetron::unique_ptr< MRAcquisitionData > | new_acquisitions_container () |
 Public Member Functions inherited from sirf::MRAcquisitionData | |
| virtual void | get_data (complex_float_t *z, int all=1) |
| virtual void | set_user_floats (float const *const z, int const idx) |
| virtual bool | is_complex () const |
| virtual void | dot (const DataContainer &dc, void *ptr) const |
| calculates the dot product of this container with another one | |
| complex_float_t | dot (const DataContainer &a_x) |
| virtual void | axpby (const void *ptr_a, const DataContainer &a_x, const void *ptr_b, const DataContainer &a_y) |
*this = the linear combination of x and y | |
| virtual void | xapyb (const DataContainer &a_x, const DataContainer &a_a, const DataContainer &a_y, const DataContainer &a_b) |
*this = elementwise sum of two elementwise products x*a and y*b | |
| virtual void | xapyb (const DataContainer &a_x, const void *ptr_a, const DataContainer &a_y, const void *ptr_b) |
| alternative interface to the above | |
| virtual void | multiply (const DataContainer &x, const DataContainer &y) |
*this = the elementwise product x*y | |
| virtual void | divide (const DataContainer &x, const DataContainer &y) |
*this = the elementwise ratio x/y | |
| virtual void | maximum (const DataContainer &x, const DataContainer &y) |
*this = the elementwise max(x, y) | |
| virtual void | minimum (const DataContainer &x, const DataContainer &y) |
*this = the elementwise min(x, y) | |
| virtual float | norm () const |
| returns the norm of this container viewed as a vector | |
| virtual void | write (const std::string &filename) const |
| AcquisitionsInfo | acquisitions_info () const |
| void | set_acquisitions_info (std::string info) |
| void | set_acquisitions_info (const AcquisitionsInfo info) |
| ISMRMRD::TrajectoryType | get_trajectory_type () const |
| void | set_trajectory_type (const ISMRMRD::TrajectoryType type) |
| void | set_trajectory (const uint16_t traj_dim, float *traj) |
| gadgetron::unique_ptr< MRAcquisitionData > | clone () const |
| bool | undersampled () const |
| int | get_acquisitions_dimensions (size_t ptr_dim) const |
| void | get_kspace_dimensions (std::vector< size_t > &dims) const |
| uint16_t | get_trajectory_dimensions (void) const |
| void | sort () |
| void | sort_by_time () |
| bool | sorted () const |
| void | set_sorted (bool sorted) |
| std::vector< KSpaceSubset::SetType > | get_kspace_order () const |
| Function to get the indices of the acquisitions belonging to different dimensions of k-space. More... | |
| std::vector< KSpaceSubset > | get_kspace_sorting () const |
| Function to get the all KSpaceSubset's of the MRAcquisitionData. | |
| void | organise_kspace () |
| Function to go through Acquisitions and assign them to their k-space dimension. More... | |
| virtual std::vector< int > | get_flagged_acquisitions_index (const std::vector< ISMRMRD::ISMRMRD_AcquisitionFlags > flags) const |
| virtual std::vector< int > | get_slice_encoding_index (const unsigned kspace_encode_step_2) const |
| virtual void | get_subset (MRAcquisitionData &subset, const std::vector< int > subset_idx) const |
| virtual void | set_subset (const MRAcquisitionData &subset, const std::vector< int > subset_idx) |
| std::vector< int > | index () |
| const std::vector< int > & | index () const |
| int | index (int i) const |
| void | read (const std::string &filename_ismrmrd_with_ext) |
| Reader for ISMRMRD::Acquisition from ISMRMRD file. filename_ismrmrd_with_ext: filename of ISMRMRD rawdata file with .h5 extension. More... | |
| Public Member Functions inherited from sirf::DataContainer | |
| bool | is_empty () const |
| std::unique_ptr< DataContainer > | clone () const |
| void | conjugate () |
| overwrites this container's complex data with complex conjugate values | |
| std::unique_ptr< DataContainer > | conjugate () const |
| returns unique pointer to the complex-conjugated copy of this container | |
Additional Inherited Members | |
| Static Public Member Functions inherited from sirf::MRAcquisitionData | |
| static void | axpby (complex_float_t a, const ISMRMRD::Acquisition &acq_x, complex_float_t b, ISMRMRD::Acquisition &acq_y) |
| static void | xapyb (const ISMRMRD::Acquisition &acq_x, complex_float_t a, ISMRMRD::Acquisition &acq_y, complex_float_t b) |
| static void | xapyb (const ISMRMRD::Acquisition &acq_x, const ISMRMRD::Acquisition &acq_a, ISMRMRD::Acquisition &acq_y, const ISMRMRD::Acquisition &acq_b) |
| static complex_float_t | dot (const ISMRMRD::Acquisition &acq_x, const ISMRMRD::Acquisition &acq_y) |
| static void | multiply (const ISMRMRD::Acquisition &acq_x, ISMRMRD::Acquisition &acq_y) |
| static void | divide (const ISMRMRD::Acquisition &acq_x, ISMRMRD::Acquisition &acq_y) |
| static float | norm (const ISMRMRD::Acquisition &acq_x) |
| static void | ismrmrd_par_info (const char *par, int *output) |
| static void | ismrmrd_par_value (ISMRMRD::Acquisition &acq, const char *name, unsigned long long int *v) |
| static void | ismrmrd_par_value (ISMRMRD::Acquisition &acq, const char *name, float *v) |
| Protected Attributes inherited from sirf::MRAcquisitionData | |
| bool | sorted_ = false |
| std::vector< int > | index_ |
| std::vector< KSpaceSubset > | sorting_ |
| AcquisitionsInfo | acqs_info_ |
| Static Protected Attributes inherited from sirf::MRAcquisitionData | |
| static gadgetron::shared_ptr< MRAcquisitionData > | acqs_templ_ |
Detailed Description
A vector implementation of the abstract MR acquisition data container class.
Acquisitions are stored in an std::vector<shared_ptr<ISMRMRD::Acquisition> > object.
The documentation for this class was generated from the following files:
- /home/sirfuser/devel/buildVM/sources/SIRF/src/xGadgetron/cGadgetron/include/sirf/Gadgetron/gadgetron_data_containers.h
- /home/sirfuser/devel/buildVM/sources/SIRF/src/xGadgetron/cGadgetron/gadgetron_data_containers.cpp
